Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRN-ESGYRDYKTSDLNWVYLVKNLRNAG-----------LSVESLIEFATLA--QLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
3Q1M Chain:A ((7-147))
-SIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQT-ISLVKKRMKRQMEYPALGEVFV--LDEEEIRIIQTEAEGLGPENV---------
General information:
TITO was launched using:
RESULT:
Template:
3Q1M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22116 for 588 contacts (-37.6/contact) +
2D Compatibility (PS) -13918 + (NN) -7455 + (LL) 1364
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -53875.0 ( -91.62 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3Q1M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q1M-query.scw
PDB file :
Tito_Scwrl_3Q1M.pdb
: