Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKR-----NKDG-IPGRVATIEYDPNRSANIALINYADGEKRYIIAAKGLEVGQTIYSG-----AEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKKK |
3J7Y Chain:D ((73-270)) | -------------------------TITPVK-----MRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV-AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRP----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33671 for 1324 contacts (-25.4/contact) +
2D Compatibility (PS) -20132 + (NN) -1608 + (LL) 2572
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -68639.0 ( -51.84 by residue)
QMean score : 0.350
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