Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS |
| 4FF5 Chain:A ((38-266)) | NIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIVRVHSGTTKENDASFINGIDKAYKSHITELQKRN------------------------------------------VPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSP----------SYYWLDVEDKTMSNMNEGVENFRAKLASLGAKN-----------------------------------IGIYVGVYFMEEHSIDTGKFT--------SVWIPSYGSDSGF-LESSPKTDLDYDIHQYTSKGKIAGFDHD---LDINVISPLKNKEETFRKLFLKP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50274 for 1882 contacts (-26.7/contact) +
2D Compatibility (PS) -23153 + (NN) 1433 + (LL) 7160
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -71384.0 ( -37.93 by residue)
QMean score : 0.265
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