Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
2KIX Chain:A ((1-33))
--------------------------------------------MLEPFQILSISSFILSALHFIAWTIGHLNQIKR--
General information:
TITO was launched using:
RESULT:
Template:
2KIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10910 for 132 contacts (-82.7/contact) +
2D Compatibility (PS) -3295 + (NN) 779 + (LL) 3408
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -12318.0 ( -93.32 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2KIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KIX-query.scw
PDB file :
Tito_Scwrl_2KIX.pdb
: