Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSEAESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILREGLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNKT---DLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK
2DYK Chain:A ((6-156))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVETDRGRFLLVDTGGLWSGDKWEKKI-QEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPKHELYLGPLYGLGFGDPI-PTSSEHARGLEELLEAI------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53453 for 1011 contacts (-52.9/contact) +
2D Compatibility (PS) -14929 + (NN) -5401 + (LL) 25492
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -59591.0 ( -58.94 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2DYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DYK-query.scw
PDB file : Tito_Scwrl_2DYK.pdb: