Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSEAESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILREGLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNKT---DLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK |
2DYK Chain:A ((6-156)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVETDRGRFLLVDTGGLWSGDKWEKKI-QEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPKHELYLGPLYGLGFGDPI-PTSSEHARGLEELLEAI------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53453 for 1011 contacts (-52.9/contact) +
2D Compatibility (PS) -14929 + (NN) -5401 + (LL) 25492
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -59591.0 ( -58.94 by residue)
QMean score : 0.526
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