Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKYLKVSRIIKRRPVAKEVADKGRVK--VNGVLAKSSTDLKLNDQVEIRFGNKLLTVKVLEMK-DSTKKEDAIKMYEIINETRIETDEQA
1ZC1 Chain:A ((121-183))
--------LGQFVKLEPQSVDFLDISDPKAVLENVLRNFST-LTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPVGYVE
General information:
TITO was launched using:
RESULT:
Template:
1ZC1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16272 for 301 contacts (-54.1/contact) +
2D Compatibility (PS) -6303 + (NN) 887 + (LL) 728
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -27510.0 ( -91.40 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1ZC1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZC1-query.scw
PDB file :
Tito_Scwrl_1ZC1.pdb
: