Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNQLIYTGKAKDIYSTKDENVIRTVYKDQATMLNGARKETIDGKGALNNQISSLIFEKLNMAGVVTHYIEQISKNEQLNKKVDIIPLEVVLRNVTAGSFSKRFGVEEGRVLETPIVEFYYKNDDLNDPFINDEHMKFLGIVNDEEIAYLKGETRRINELLKDWFAQIGLNLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGNH-MDKDVFRRDLGSLTDVYQVVLEKLIAL
2Z02 Chain:A ((9-239))
LKKQPLYSGKAKSIYEIDDDKVL-IEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERLGLL
General information:
TITO was launched using:
RESULT:
Template:
2Z02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69437 for 1793 contacts (-38.7/contact) +
2D Compatibility (PS) -24389 + (NN) -4360 + (LL) 100
1D Compatibility (HY) -20000 + (ID) 5250
Total energy: -123336.0 ( -68.79 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2Z02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z02-query.scw
PDB file :
Tito_Scwrl_2Z02.pdb
: