Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
2FWI Chain:A ((23-143))
---PVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSADRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI---
General information:
TITO was launched using:
RESULT:
Template:
2FWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83866 for 1019 contacts (-82.3/contact) +
2D Compatibility (PS) -13069 + (NN) -4951 + (LL) 788
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -118348.0 ( -116.14 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2FWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWI-query.scw
PDB file :
Tito_Scwrl_2FWI.pdb
: