Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIVHAFINSGKIGVVEVLFATSDDKLLMTKMSEFQRHYPGDYLAIYDLPLDTDLNKLSHYPSVAISKEDFHEEKANETNENS
3GHF Chain:A ((12-57))
-----------GSSFTLSVVHLHEAEPEVIRQALEDKIAQAP-AFLK--HAPVVINVSGLESPVNWPELHKIVTSTGLRIIGVSG
General information:
TITO was launched using:
RESULT:
Template:
3GHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8464 for 203 contacts (-41.7/contact) +
2D Compatibility (PS) -5072 + (NN) -3355 + (LL) 1644
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -17897.0 ( -88.16 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_3GHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GHF-query.scw
PDB file :
Tito_Scwrl_3GHF.pdb
: