Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKDNAVELEERVVAINRVTKVVKGGRRLRFAALVVVGDRNGRVGFGTGKAQEVPEAIRKAVEAAKKNMVEVPMVGTTIPHEVRSEFGGAKVLLKPAVEGAGVAAGGAVRAVIELAGVADITSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGISVSDLA
1IBL Chain:E ((5-152))
--------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG------
General information:
TITO was launched using:
RESULT:
Template:
1IBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68607 for 1180 contacts (-58.1/contact) +
2D Compatibility (PS) -16099 + (NN) -3892 + (LL) 820
1D Compatibility (HY) -12800 + (ID) 4150
Total energy: -104728.0 ( -88.75 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1IBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBL-query.scw
PDB file :
Tito_Scwrl_1IBL.pdb
: