Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPKRGFSNINAKEYALVNLDQLNVFEDGTEVTPVVLKEAGIVRAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI
2ZJP Chain:I ((4-140))
---HDLKPTPGSRKDRKRVGRG-PGGTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNNVGT-TYEVVKLSQLQDLED-TTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLP
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4153 for 701 contacts (5.9/contact) +
2D Compatibility (PS) -14135 + (NN) -1104 + (LL) 392
1D Compatibility (HY) -7600 + (ID) 3150
Total energy: -21444.0 ( -30.59 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: