Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIYHMILCNSDIMKILAIIKSLPLNDCWLCAGTLRNFIWNKLSGINETLTSDIDVVFFDKNISYEETVVLEQQLKDNYPQYDWELKNEFYMNTHSPNTPKYTSSKDAISKFPEKCTAVGARLDDRNQLELYLPYGEEEILNFIVSPTPYFEEDLLRYNVYLKRVDKKKWNNIWPRLTIIKK |
1J6W Chain:A ((59-81)) | ------------------------------LFAGFMRDHLNGD----------SIEIIDISPMGCRTGFYMSLIGTPNEQKVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLSLDN-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9101 for 86 contacts (-105.8/contact) +
2D Compatibility (PS) -2200 + (NN) 1153 + (LL) 5532
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -6866.0 ( -79.84 by residue)
QMean score : 0.121
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