Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNESDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4OXD Chain:C ((22-180)) | -------------------------------------------------------------------IIVAN---KHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDH---YSGFRSYETQTKLY--------------------------SARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAESGLSLEEYYGFEGGDYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28449 for 1066 contacts (-26.7/contact) +
2D Compatibility (PS) -14938 + (NN) -2219 + (LL) 6940
1D Compatibility (HY) -6800 + (ID) 3050
Total energy: -48516.0 ( -45.51 by residue)
QMean score : 0.445
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