Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFE-----NKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN
2J1D Chain:G ((102-178))----NILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKV


General information:
TITO was launched using:
RESULT:

Template: 2J1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25979 for 421 contacts (61.7/contact) +
2D Compatibility (PS) -7632 + (NN) -3401 + (LL) 676
1D Compatibility (HY) -5200 + (ID) 900
Total energy: 9522.0 ( 22.62 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2J1D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J1D-query.scw
PDB file : Tito_Scwrl_2J1D.pdb: