Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNMMKYISELTTLIALAGLMVIITLINPNFLTTNNLLNLLLQVTANGFIAFGMTFVILTGGIDLSVGSILALSSALTAGLIGHGVPVGIAIVLSVALGGILGMLNGLFISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMFLTFIILYILLHKTAFGKSVYALGGNEKAAYISGIKLNKVKIIIYTISGIMASISGLIITSRLSSAQPTAGASYEMDAIAAVVLGGTSLSGGKGRIIGTLIGALIIGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK |
1Y6U Chain:A ((17-34)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKIIDTL---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1199 for 78 contacts (-15.4/contact) +
2D Compatibility (PS) -1664 + (NN) 1354 + (LL) 18848
1D Compatibility (HY) 0 + (ID) 250
Total energy: 17089.0 ( 219.09 by residue)
QMean score : -0.010
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