Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMN-------NVPENLVTMTKYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGN------NLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 1ZM8 Chain:A ((103-190)) | ----------------------------------------------------------------------------------------------------------------SGYARGHIAPSADRTKTTEDNAATFLMTNMMPQTPDNNR-------NTWGNLEDYCRELVSQ--GKELYIVAGPNGSLGKPLKGKVTVPKSTWKIVVVLDSPGSGLEGITANTRVIAVNIPNDPELNNDWRAYKVSVDELESLTGYDFLSNVSPNIQTSIESKVDN------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24583 for 454 contacts (-54.1/contact) +
2D Compatibility (PS) -8284 + (NN) -220 + (LL) 10748
1D Compatibility (HY) 1600 + (ID) 600
Total energy: -21339.0 ( -47.00 by residue)
QMean score : 0.290
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