Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLKDKNIFITGSSRGIGLAIAHQFAQLGANIVLN-GRS-EISEDLIAEFADYGVKVIAISGDVSSFEDANRMIKEAIASLGSVDVLVNNAGITNDKLMLKMTVEDFESVLKINLTGAFNMTQSVLKPMTKARQGAIINISSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGIRVNAIAPGFIESDMTDVIPEKMQEAILAQIPMKRIGKGKEVAQVASFLA---EQEYLTGQVIAIDGGMTMQ
1EDO Chain:A ((4-244))
-------VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIAI-
General information:
TITO was launched using:
RESULT:
Template:
1EDO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137318 for 2056 contacts (-66.8/contact) +
2D Compatibility (PS) -25237 + (NN) -2337 + (LL) 596
1D Compatibility (HY) -21600 + (ID) 5750
Total energy: -191646.0 ( -93.21 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_1EDO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EDO-query.scw
PDB file :
Tito_Scwrl_1EDO.pdb
: