Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAIPAFALSVLSGQFIGQKLADSLVYQASRTVRADFMKGFGNMQLGSDSDTDMFMQTKCTSEA
3A1Y Chain:A ((1-58))
MEYVYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVIEKAA------
General information:
TITO was launched using:
RESULT:
Template:
3A1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20604 for 340 contacts (-60.6/contact) +
2D Compatibility (PS) -6037 + (NN) -344 + (LL) 392
1D Compatibility (HY) 1600 + (ID) 450
Total energy: -25443.0 ( -74.83 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_3A1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A1Y-query.scw
PDB file :
Tito_Scwrl_3A1Y.pdb
: