Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLHKLFITVIATLGMLGVMTFGLPTQPQNVTPIVHADVNSSVDTSQEFQNNLKNAIGNLPFQYVNGIYELNNNQTNLNADVNVKAYVQNTIDNQQRPSTANAMLDRTIRQYQNRRDTTLPDANWKPLGWHQVATNDHYGHAVDKGHLIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYES-LVRKAVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTLEFNVAIPNTQASYTMDYATGEITLN |
| 3NKQ Chain:A ((635-702)) | ----------------------------------------------------------------------------------------------------------------------------------------------QMSYGFLFPPYLSSSPEAKY-DAFLVTNMVPMYPAFKR-------VWTYFQRVLVKKYASERNGVNVISGPIFDYNYNGLRDIEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3666 for 356 contacts (-10.3/contact) +
2D Compatibility (PS) -7144 + (NN) -413 + (LL) 8564
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -6409.0 ( -18.00 by residue)
QMean score : 0.370
|
|
|