Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MSDVVEKQTAKSFIMNVLNGLALGTVIV-LIPGAILGELMKALLPMWSGFATLIAATAVATSMMGLVIGI-MVGLNFKFNPIQSASLGL-AVMFAGGAATFLKGAIMLKGTG-DIINMGITAALGVLLIQFLSDKTKSFTLIVIPTVTLLLVG----GVGHVL----LPYVKMITTMIGQGIASLLGLQP---VLMSILIAMIFCFL------IVSPITTVGIALAISLSGIGSGAANLGICAASFGLCMAGWSVNS-KGTALAHVLGSP--KISMANVLAKPKIMLP--MISSAAIL----GILGALFNIQGTPASAGFGISG--LIGPINALNLAKGGWSVMNMLLIIIIFVAAP--IILNFI-----FNYLFI----KVLKIIDPMDYKLDI------ |
| 3BWS Chain:A ((27-433)) | GTEIVKFSIHPYKGTVIRLGEEILPFKVLEMDKNIALVEMAIPVYKDEKEIELKLS-SPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAI---PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -395149 for 2659 contacts (-148.6/contact) +
2D Compatibility (PS) -37632 + (NN) 5106 + (LL) 296
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -439429.0 ( -165.26 by residue)
QMean score : 0.021
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