Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTS--------------KAAQQSMLTLILSRVFDTQ---YGDKVSDKKVSEAYNKTAKGYG----NSFSSALSQ-AGLTPEGYKQQIRTTMLVEYAVKEAA-KKELTEANYKEAYKNYT----PETSVQVIKLDAED-----------KAKSVLKDVKADGADFAKIAKEKTTATD---KKVEY-KFDSAGTSL---PKEVMSAAFKLDKNGVSDVVSTV-DSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 3NRK Chain:A ((50-354)) | ----------------------------LNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQLKIAVPPPNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISS--FDLYKYSKITATIAAPLPNGGVSEVFRDERK------RYCILKIEGKRP--TPMENLRGGIQNILYRDKEED--TFHRWLKESRAEIPIQIFDEAYRKENKIPLKEETFHL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47631 for 1691 contacts (-28.2/contact) +
2D Compatibility (PS) -27561 + (NN) -7790 + (LL) 2796
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -94436.0 ( -55.85 by residue)
QMean score : 0.553
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