Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------MFGKLLKYELKSVGKWYLTLNAAVLLVSIILGLVLKALGGNVSTDTN----STSAQIFTIILVLLLAMVISGSLLSTLAIIIKRFYSNIFGRQGYLTLTLPVTTNQIICSKLLASLLWSIFNI------------FIVIIGIILVILPLVGIG----------------QFVVAFPEIYKII---------SSSNAPLFIAYFFLSYVAGTLLIYLSIAVG-QLFTNKRVLMGIVSYFGISLLITFLTLIIDSIFHIDLFNSHANATFSQPVLLYNI--LVSIVEIAIFYMLTHSIIKYKLNIQ |
| 1VSG Chain:A ((1-362)) | AAEKGFKQAFWQPLCQVSEELDDQPKGALFTLQAAASKIQKMRDAALRASIYAEINHGTNRAKAAVIVANHYAMKADSGLEALKQTLSSQEVTATATASYLKGRIDEYLNLLLQTKESGTSGCMMDTSGTNTVTKAGGTIGGVPCK-LQLSPIQPKRPAAT-YLGKAGYVGLTRQADAANNFHDNDAECRLASGHNTNGLGKSGQLSAAVTMAAGYVTVANSQTAVTVQALDALQEASGAAHQPWIDAWKAKKALTGAETAEFRNET------AGIAGKTGVTKLVEEALLK---KKDSEASEIQTELKKYFS-GHENEQWTAIEKLISEQPVAQNLVGD--NQPTKLGELEGNAKLTTILAYYRMETAGKFEVLT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203876 for 1380 contacts (-147.7/contact) +
2D Compatibility (PS) -25025 + (NN) -1649 + (LL) 972
1D Compatibility (HY) 15600 + (ID) 1700
Total energy: -215678.0 ( -156.29 by residue)
QMean score : 0.136
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