Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
| 1Z6O Chain:M ((4-33)) | ---------------------------------------------------------------------------------------------------------------NVNPVQIPKDWITMHRSCR------NSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11 for 95 contacts (0.1/contact) +
2D Compatibility (PS) -2885 + (NN) 1703 + (LL) 8436
1D Compatibility (HY) 0 + (ID) 200
Total energy: 7065.0 ( 74.37 by residue)
QMean score : -0.144
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