Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNIKKMLFGSYDYHKISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK
1PD7 Chain:B ((1-24))
VRMNI-QMLLEAADYLERREREAEH-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -225 for 80 contacts (-2.8/contact) +
2D Compatibility (PS) -2091 + (NN) 1487 + (LL) 2116
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -763.0 ( -9.54 by residue)
QMean score : -0.036
(partial model without unconserved sides chains):
PDB file :
Tito_1PD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PD7-query.scw
PDB file :
Tito_Scwrl_1PD7.pdb
: