Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIK-ITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
3A1Y Chain:A ((36-57)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARIKALVAALEGVNIDEVIEKAA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1396 for 68 contacts (-20.5/contact) +
2D Compatibility (PS) -2273 + (NN) -273 + (LL) 12540
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 7198.0 ( 105.85 by residue)
QMean score : 0.158
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