Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
3LGQ Chain:A ((389-431)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LENGKVYTSHSQRTPRDMMGQACLNCHAEWTEDQALYAIDYIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5925 for 194 contacts (30.5/contact) +
2D Compatibility (PS) -4345 + (NN) 387 + (LL) 12684
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 11151.0 ( 57.48 by residue)
QMean score : 0.408
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