Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKVRRHFTDDFKQQIVDLY-NVGRKRSSLIKEYELTPSTFDKWVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
2COB Chain:A ((10-58))
----RYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMR--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2COB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15323 for 293 contacts (-52.3/contact) +
2D Compatibility (PS) -4906 + (NN) 912 + (LL) 3144
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -17723.0 ( -60.49 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_2COB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COB-query.scw
PDB file :
Tito_Scwrl_2COB.pdb
: