Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
3EKS Chain:A ((187-240)) | ----------------------------------------------------------------------------------------------------------------DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVA-LDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3632 for 264 contacts (-13.8/contact) +
2D Compatibility (PS) -5420 + (NN) 1791 + (LL) 9256
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -1855.0 ( -7.03 by residue)
QMean score : 0.334
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