Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNRKDDHIKYALK----YQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGGSEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDEDDSYPTTDLYPDLKLATNIGLDKPLPAAE----STVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIEN--QRGRDR-SYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVG----LSRTVLELVERYPVDDVIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQLKEANAK |
| 1VCG Chain:A ((9-326)) | ------KHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMT------ERINLALAEAAEALGVGMMLGSGRILLERP------VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAER-----VAAWIGDYLEELRTALFAIGARNPKEARGRVERV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213138 for 2513 contacts (-84.8/contact) +
2D Compatibility (PS) -31030 + (NN) -15597 + (LL) 460
1D Compatibility (HY) -15200 + (ID) 4400
Total energy: -278905.0 ( -110.98 by residue)
QMean score : 0.503
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