Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILTLFPEMF-APLEHSIVGKAKERGLLEINYHNFRENAE-KSRHVDDEPYGGGQGMLLRAQPIFDTIDKIDA--QKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDERIKSLVT-DEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSSGLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL
4IG6 Chain:A ((22-243))
MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESME-GSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRPDLL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127172 for 1521 contacts (-83.6/contact) +
2D Compatibility (PS) -23039 + (NN) -5968 + (LL) 2660
1D Compatibility (HY) -22400 + (ID) 5100
Total energy: -181019.0 ( -119.01 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4IG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IG6-query.scw
PDB file :
Tito_Scwrl_4IG6.pdb
: