Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPNRKLRLEREKLAKEKG
1XRK Chain:A ((104-116))
---REFALRDPAGNCVHFVAE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -473 for 38 contacts (-12.4/contact) +
2D Compatibility (PS) -1367 + (NN) -922 + (LL) 2428
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -2184.0 ( -57.47 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_1XRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRK-query.scw
PDB file :
Tito_Scwrl_1XRK.pdb
: