Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNSVVVHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE
4WCW Chain:B ((24-113))
-------------------DDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFAALDRLWGDCPV---------
General information:
TITO was launched using:
RESULT:
Template:
4WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59361 for 593 contacts (-100.1/contact) +
2D Compatibility (PS) -10302 + (NN) -9323 + (LL) 2840
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -85796.0 ( -144.68 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_4WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCW-query.scw
PDB file :
Tito_Scwrl_4WCW.pdb
: