Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALELLTPFTKVELEEKKRDTNRKQIGIMGGNFNPVHNAHLVVADQVRQQLCLDQVLLMPEFQPPHIDKKETIDEQHRLKMLELAIEGIDGLSIEPIEIERKGISYTYDTMKLL-IEKNPDVDYYFIIGADMVEYLPKWHRIDELVKMVQFVGVQRPKYKA------------------------GTSYPVIWVDLPLMDISSSMIRQFIKSNRQPNYLLPKEVLDYIRKEGLYK
1YUL Chain:A ((23-231))
-----------------------KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRETPQ-VSAAQRLAMVERAVAGVERLTVDPRELQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVW-QTPLA-VSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYR
General information:
TITO was launched using:
RESULT:
Template:
1YUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131507 for 1416 contacts (-92.9/contact) +
2D Compatibility (PS) -20122 + (NN) -11686 + (LL) 2216
1D Compatibility (HY) -15600 + (ID) 3250
Total energy: -179949.0 ( -127.08 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1YUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YUL-query.scw
PDB file :
Tito_Scwrl_1YUL.pdb
: