Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQ-SGE--READFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAE---SFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDDLPF
1EYG Chain:A ((6-113))
-VNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQML------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61611 for 624 contacts (-98.7/contact) +
2D Compatibility (PS) -10897 + (NN) -1712 + (LL) -360
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -85230.0 ( -136.59 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1EYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYG-query.scw
PDB file :
Tito_Scwrl_1EYG.pdb
: