Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKRLPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICCATIPTMEAALKAIKEERGDRGEIQIELYGDWTYEQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLSTDTLQLFEGVDVFTFIAGRGITEADDPAAAARAFKDEIKRIWG
1XBZ Chain:A ((3-215))
----LPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGD---VQIDLTGYWTWEQAQQWRDAGIGQVVYHRSVDAQ---VAWGEADITAIKRLSDMGFKVTVAGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELW-
General information:
TITO was launched using:
RESULT:
Template:
1XBZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145471 for 1813 contacts (-80.2/contact) +
2D Compatibility (PS) -22745 + (NN) -10226 + (LL) 432
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -202710.0 ( -111.81 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1XBZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XBZ-query.scw
PDB file :
Tito_Scwrl_1XBZ.pdb
: