Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRIRKSLIFVLGVVTLICLCACTKQSQQKNGLSVVTSFYPVYSITKAVSGDLNDI-KMIRSQSGIHGFEPSSSDVAAIYDADLFLYHSHTLE----AWARRLEPSLHHSKV-SVIEASKGMTLDKVHGLEDVEAEKGVDESTLYDPHTWNDPVKVSEEAQLIATQLAKKDPKNAKVYQKNADQFSDKAMAIAEKYKPKFKA--AKSKYFVTSHTAFSYLAKRYGLTQLGIAGVSTEQEPSAKKLAEIQEFVKTYKVKTIFVEEGVSPKLAQAVASATRVKIASLSPLEAVPKNNK---DYLENLETNLKVLVKSLNQ |
| 3HH8 Chain:A ((15-292)) | -----------------------------SDKLKVVATNSIIADMTKAIAGDKIDLHSIVPIGQDPHEYEPLPEDAEKTSNADVIFYNGINLEDGGQAWFTKLVKNAQKTKNKDYFAVSDGIDVIYLEGA----SEKGKE-----DPHAWLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIYSEIFTDSIAKKGKPGDSYYAMMKWNLDKISEGLAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85198 for 2252 contacts (-37.8/contact) +
2D Compatibility (PS) -28894 + (NN) -13051 + (LL) 3892
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -139551.0 ( -61.97 by residue)
QMean score : 0.510
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