Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQEGQDPFQVKFE--ETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
1S12 Chain:A ((1-94))
-MIKVTVTNSFFEVTG-----------HAPDKTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELENCEVKVLAAMVR--SLKELEQKFPSQIRVEVIDNGS
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1032 for 615 contacts (-1.7/contact) +
2D Compatibility (PS) -9721 + (NN) 1911 + (LL) 1144
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -12148.0 ( -19.75 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: