Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII
2QIY Chain:C ((21-45))
-------------------------LPLFINTTEAEFAAASVQRYELNMK-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9256 for 93 contacts (-99.5/contact) +
2D Compatibility (PS) -2581 + (NN) -1985 + (LL) 5268
1D Compatibility (HY) 400 + (ID) 300
Total energy: -8454.0 ( -90.90 by residue)
QMean score : -0.021
(partial model without unconserved sides chains):
PDB file :
Tito_2QIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIY-query.scw
PDB file :
Tito_Scwrl_2QIY.pdb
: