Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTA--NG---PAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
| 2E5Q Chain:A ((8-61)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNS-KYWVLWKDIQHAGVP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18753 for 284 contacts (-66.0/contact) +
2D Compatibility (PS) -4656 + (NN) 4449 + (LL) 16640
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -3870.0 ( -13.63 by residue)
QMean score : 0.213
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