Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNNHFFYVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIFAESFSTKREAMQAEYYFKKLTRKKKELYIEEKRNSKEAVYVKAPNEL
1MK0 Chain:A ((1-97))
--MKSGIYQIKNTLNNKVYVGSAKDFEKRWKRHFKDLEKGCHSSIKLQRSFNKHGNVFECSILEEIPYEKDLIIERANFWIKELNSKINGYNIADATFG
General information:
TITO was launched using:
RESULT:
Template:
1MK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10012 for 713 contacts (14.0/contact) +
2D Compatibility (PS) -10145 + (NN) -611 + (LL) 312
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -2682.0 ( -3.76 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_1MK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MK0-query.scw
PDB file :
Tito_Scwrl_1MK0.pdb
: