Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRILEKAPAKI-NLSLDVTRKRPDGYHEVEMIMTTID---LADRIELTELAEDEVRVSSHN--RFV---PDD-QRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETL----AELGAEIGSDVSF-----CVYGGTALATGRGEKIKHISTPPHCWV-ILAKPTIGVSTAEVYRAL-----KLDGIEHP-DVQGMIEAIEEKSFQKMCSRLGNVL-ESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD
4RPF Chain:A ((7-285))------APASIGNVSV--------GFDVLGAAVSPIDGTLLGDCVSVTA-AE---RFSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGYISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLPGFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQ-------------------


General information:
TITO was launched using:
RESULT:

Template: 4RPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101803 for 1952 contacts (-52.2/contact) +
2D Compatibility (PS) -27283 + (NN) -8170 + (LL) 2876
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -155930.0 ( -79.88 by residue)
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_4RPF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RPF-query.scw
PDB file : Tito_Scwrl_4RPF.pdb: