Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPG---GSTGLVHISEV-ADNYVKDINDHLKVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
2EQS Chain:A ((264-336))
----IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGT-KTSLSMK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41196 for 445 contacts (-92.6/contact) +
2D Compatibility (PS) -7143 + (NN) 2332 + (LL) 2308
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -52749.0 ( -118.54 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_2EQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQS-query.scw
PDB file :
Tito_Scwrl_2EQS.pdb
: