Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNNSFYEDEHT-------TEKEWKDQIRYNILLEDL----LTRDIDISNKELESFYNKNKELYQFDDSYRIRHIVVK------------DEEEAREVLKELKGGSSFEAVAAERSTDRYTSPYGGDLGF--VTEASDNIPSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDKATVKTLWKEADVSWFYGEKSTK |
| 2PV3 Chain:A ((51-260)) | ----------------------------------------------------------------MERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARN--DFGKLAIAHSADQ-QALNGGQMGWGRIQE----LPGIFAQALSTAKKGDIV-GPIRSGVGFHILKVND-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19623 for 1054 contacts (-18.6/contact) +
2D Compatibility (PS) -19421 + (NN) -10608 + (LL) 8832
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -54020.0 ( -51.25 by residue)
QMean score : 0.536
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