Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARSLKKGPFVDGHLMTKIEKLNETDKKQVVKTWSRRSTIFPQFIGHTIAVYDGRKHVPVFISEDMVGHKLGEFAPTRTYKGHASDDKKTRR
1XNR Chain:S ((2-81))
-PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYR-----------
General information:
TITO was launched using:
RESULT:
Template:
1XNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42542 for 492 contacts (-86.5/contact) +
2D Compatibility (PS) -8594 + (NN) -1297 + (LL) 424
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -65109.0 ( -132.34 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1XNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNR-query.scw
PDB file :
Tito_Scwrl_1XNR.pdb
: