Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDL--NVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF
5GAG Chain:P ((25-117))-----------------------------RLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF


General information:
TITO was launched using:
RESULT:

Template: 5GAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35322 for 680 contacts (-51.9/contact) +
2D Compatibility (PS) -10164 + (NN) -4736 + (LL) 2288
1D Compatibility (HY) -6000 + (ID) 2600
Total energy: -56534.0 ( -83.14 by residue)
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_5GAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAG-query.scw
PDB file : Tito_Scwrl_5GAG.pdb: