Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIIN-SAELME-EIYMKIDEKHTQCVTK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4OY2 Chain:A ((10-502)) | NLNIQHSQPAINLQSPFYKVAVPRYQLRHFHRENFGSHIRPGTKIVFSKLKARKRKRDKGKDVKESFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGETHVLGVQDKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGISNRFYLRNINHLFTVG-QTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSKAISIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMSQGLQFQEDNEAYNFDSKLKSLEENLLPWNITKNFINSTQMRAMIQIHGVGDPTGCGEGFSFLKTSMKHSYNVAQQQKAYDEEIAKTWYTHTKSLSISNPFEEMTNPDEINQTNKHVKTDRDDKKILKIVRKKRDENGIIQRQTIFIRDPRVIQGYIKIKEQDKEDVN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 5163 for 195 contacts (26.5/contact) +
2D Compatibility (PS) -5807 + (NN) 1143 + (LL) -80
1D Compatibility (HY) 3200 + (ID) 50
Total energy: 3569.0 ( 18.30 by residue)
QMean score : 0.304
|
|
|