Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY |
| 3FF4 Chain:A ((4-90)) | -----------------------------------------------------MKKTLILGATPETNRYAYLAAERLKS-HGHE-FIPVGRKKG----------------EVLGKTIINER--------PVIEGVDTVTLYINP---------QNQLSEYNYILSLKPKRVIF-NP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27874 for 612 contacts (-45.5/contact) +
2D Compatibility (PS) -9468 + (NN) -4939 + (LL) 17888
1D Compatibility (HY) 800 + (ID) 550
Total energy: -24143.0 ( -39.45 by residue)
QMean score : 0.416
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