Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MILVSSCLGGIECRYNG------SHAASEKIRKLVDEKKAVMACPELLGGFSTPREPAEIIGGTG----EDVLNGTAKIVTASGEDVTELYMEGAAKTLAYA---KEINASAVILKENSPSCGSGF--IYNGTFSGKKITGSGVTAALLKQAGYRVI------------SENELNDIL----- |
| 4LVI Chain:A ((1-194)) | SYMVARMQKMKAGNLGGAFKHNERVSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCDEWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQEDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26318 for 916 contacts (-28.7/contact) +
2D Compatibility (PS) -15652 + (NN) 3268 + (LL) 0
1D Compatibility (HY) -400 + (ID) 1300
Total energy: -40402.0 ( -44.11 by residue)
QMean score : 0.224
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