Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELE-LRQQEEIKKELLQKLRHDINTPLTALRLQLFYLED--QCHGQAVFESLYQQIEYISELTNEFNL-------YSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYK---PADQDVIWMSNTLWMERLFDNIFQNTLRHSKA----KKMEVTIEHGD----VFIRDDGIGFDRNESSEGLGLKIIEDTCRL-LAITYELHTNDNGTGFLFSKE |
| 4JAV Chain:A ((5-220)) | ------------------------------------------------------------------------------------------------------------------TESKELERLKRIDRMKTEFIANISHELRTPLTAIKA---YAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEA-YIDPTRIRQVLL-NLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKD-----RIFEQFYRVDSSLTYEVPG--TGLGLAITKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41152 for 1183 contacts (-34.8/contact) +
2D Compatibility (PS) -21097 + (NN) -9393 + (LL) 11656
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -76336.0 ( -64.53 by residue)
QMean score : 0.425
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