Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------MSGYSNGGGYGG-ISSFALIVVLFILLII-VGTAFVGGF-----------------------------------------------------------------------------------------
4RZ9 Chain:A ((1-179))MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLEPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEP


General information:
TITO was launched using:
RESULT:

Template: 4RZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 59 -9266 -157.05 -250.43
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -157.05
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.338

(partial model without unconserved sides chains):
PDB file : Tito_4RZ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RZ9-query.scw
PDB file : Tito_Scwrl_4RZ9.pdb: